Publications

Chatterjee S, Chowdhury S, Mallick H, Banerjee P, Garai B.  2018.  Group regularization for zero-inflated negative binomial regression models with an application to health care demand in Germany. Stat Med. 37(20):3012-3026.

Chowdhury S, Chatterjee S, Mallick H, Banerjee P, Garai B.  2018.  Group regularization for zero-inflated poisson regression models with an application to insurance ratemaking. Journal of Applied Statistics. 46(9)

Abu-Ali GS, Mehta RS, Lloyd-Price J, Mallick H, Branck T, Ivey KL, Drew DA, DuLong C, Rimm E, Izard J et al..  2018.  Metatranscriptome of human faecal microbial communities in a cohort of adult men. Nat Microbiol. 3(3):356-366.

Banerjee P, Garai B, Mallick H, Chowdhury S, Chatterjee S.  2018.  A Note on the Adaptive LASSO for Zero-Inflated Poisson Regression. Journal of Probability and Statistics.

Mehta RS, Abu-Ali GS, Drew DA, Lloyd-Price J, Subramanian A, Lochhead P, Joshi AD, Ivey KL, Khalili H, Brown GT et al..  2018.  Stability of the human faecal microbiome in a cohort of adult men. Nat Microbiol. 3(3):347-355.

Mallick H, Yi N.  2017.  Bayesian Group Bridge for Bi-level Variable Selection. Comput Stat Data Anal. 110:115-133.

Schwager E, Mallick H, Ventz S, Huttenhower C.  2017.  A Bayesian method for detecting pairwise associations in compositional data. PLoS Comput Biol. 13(11):e1005852.

Mallick H, Ma S, Franzosa EA, Vatanen T, Morgan XC, Huttenhower C.  2017.  Experimental design and quantitative analysis of microbial community multiomics. Genome Biol. 18(1):228.

Zhang X, Mallick H, Tang Z, Zhang L, Cui X, Benson AK, Yi N.  2017.  Negative binomial mixed models for analyzing microbiome count data. BMC Bioinformatics. 18(1):4.

Renfro LA, Mallick H, An M-W, Sargent DJ, Mandrekar SJ.  2016.  Clinical trial designs incorporating predictive biomarkers. Cancer Treat Rev. 43:74-82.

Mallick H, Tiwari HK.  2016.  EM Adaptive LASSO-A Multilocus Modeling Strategy for Detecting SNPs Associated with Zero-inflated Count Phenotypes. Front Genet. 7:32.

Zhang X, Mallick H, Yi N.  2016.  Zero-inflated Negative Binomial Regression for Differential Abundance Testing in Microbiome Studies. Journal of Bioinformatics and Genomics.

Mallick H.  2015.  Some Contributions to Bayesian Regularization Methods with Applications to Genetics and Clinical Trials. PhD Thesis.

Li M, Cleves MA, Mallick H, Erickson SW, Tang X, Nick TG, Macleod SL, Hobbs CA.  2014.  A genetic association study detects haplotypes associated with obstructive heart defects. Hum Genet. 133(9):1127-38.

Yi N, Xu S, Lou X-Y, Mallick H.  2014.  Multiple comparisons in genetic association studies: a hierarchical modeling approach. Stat Appl Genet Mol Biol. 13(1):35-48.

Mallick H, Yi N.  2014.  A New Bayesian Lasso. Stat Interface. 7(4):571-582.

Lakoski SG, Mallick H, McClure LA, Safford M, Kissela B, Howard G, Cushman M.  2014.  A risk algorithm for assessing short-term mortality for obese black and white men and women. Obesity (Silver Spring). 22(4):1142-8.

Weige CC, Birtwistle MR, Mallick H, Yi N, Berrong Z, Cloessner E, Duff K, Tidwell J, Clendenning M, Wilkerson B et al..  2014.  Transcriptomes and shRNA suppressors in a TP53 allele-specific model of early-onset colon cancer in African Americans. Mol Cancer Res. 12(7):1029-41.

Mallick H, Yi N.  2013.  Bayesian Methods for High Dimensional Linear Models. J Biom Biostat. 1:005.

Mallick H, Yi N.  2013.  Hierarchical Models for Genetic Association Studies. Journal of Biometrics & Biostatistics. 4(4)

Kelleher J, Mallick H, Soltau TD, Harmon CM, Dimmitt RA.  2013.  Mortality and intestinal failure in surgical necrotizing enterocolitis. J Pediatr Surg. 48(3):568-72.

Kelleher J, Bhat R, Salas AA, Addis D, Mills EC, Mallick H, Tripathi A, Pruitt EP, Roane C, McNair T et al..  2013.  Oronasopharyngeal suction versus wiping of the mouth and nose at birth: a randomised equivalency trial. Lancet. 382(9889):326-30.